Page Banner

United States Department of Agriculture

Agricultural Research Service

Related Topics

SHANNON R PINSON

Research Geneticist (Plants)

Phone: (870) 672-9300 ext. 228
Fax: (870) 673-7581
2890 HWY 130 EAST
STUTTGART, AR, 72160

Projects
Genomic Approaches and Genetic Resources for Improving Rice Yield and Grain Quality
Appropriated (D)
  Accession Number: 425079
Using Genetic Approaches to Reduce Crop Losses in Rice Due to Biotic and Abiotic Stress
Appropriated (D)
  Accession Number: 425080

Publications (Clicking on the reprint icon Reprint Icon will take you to the publication reprint.)
Identification of genetic loci underlying the kernel fissure-resistance exhibited by 'cypress' and 'saber' - (Proceedings) - (18-Feb-14)
Identification of QTLs that enhance the nutritional value of rice grain and limit accumulation of undesirable elements such as arsenic - (Proceedings) - (18-Feb-14)
Rice grain element concentration predictions based on leaf concentrations: accelerating improvement of nutritional quality - (Proceedings) - (18-Feb-14)
Early screening of recombinant inbred lines for fissure resistance in non-semidwarf rice - (Proceedings) - (18-Feb-14)
Genome wide association mapping of grain arsenic, copper, molybdenum, and zinc in rice (Oryza sativa L.) grown at four international field sites - (Peer Reviewed Journal)
Norton, G.J., Pinson, S.R., Tarpley, L., Eizenga, G.C., Salt, D.E., Meharg, A.A., Price, A.H. 2014. Genome wide association mapping of grain arsenic, copper, molybdenum, and zinc in rice (Oryza sativa L.) grown at four international field sites. PLoS One. 9(2): e89685.
Genetic and field management strategies to enhance the nutritional value of rice grains and limit accumulation of undesirable elements such as arsenic - (Abstract Only)
Pinson, S.R., Tarpley, L., Chittoori, R., Yan, W., Guerinot, M.L., Salt, D.E. 2013. Genetic and field management strategies to enhance the nutritional value of rice grains and limit accumulation of undesirable elements such as arsenic. ASA-CSSA-SSSA Annual Meeting Abstracts. Paper number 78886, Tampa FL, Nov. 2-6, 2013.
Generalizations on the use of leaf element concentrations to accelerate improvement of rice grain nutritional quality - (Abstract Only)
Tarpley, L., Chittoori, R., Pinson, S.R., Salt, D.E., Guerinot, M.L., Cothren, T. 2013. Generalizations on the use of leaf element concentrations to accelerate improvement of rice grain nutritional quality. ASA-CSSA-SSSA Annual Meeting Abstracts. Paper number 78835, Tampa, FL, Nov. 2-6, 2013.
Mapping and validation of quantitative trait loci associated with concentrations of 16 elements in unmilled rice grain - (Peer Reviewed Journal)
Zhang, M., Pinson, S.R., Tarpley, L., Huang, X., Lahner, B., Yakubova, E., Baxter, I.R., Guerinot, M., Salt, D.E. 2014. Mapping and validation of quantitative trait loci associated with concentrations of 16 elements in unmilled rice grain. Theoretical and Applied Genetics. Vol 127: 137-165.
Three QTLs conferring resistance to kernel fissuring in rice (Oryza sativa L.) identified by selective genotyping in two tropical japonica populations - (Peer Reviewed Journal)
Pinson, S.R., Jia, Y., Gibbons, J. 2013. Three QTLs conferring resistance to kernel fissuring in rice (Oryza sativa L.) identified by selective genotyping in two tropical japonica populations. Crop Science. 53:2434-2443.
Patterns of element concentrations help explain varietal differences in rice seedling vigor Reprint Icon - (Experiment Station)
Chittoori, R., Pinson, S.R., Salt, D.E., Tarpley, L. 2013. Patterns of element concentrations help explain varietal differences in rice seedling vigor. Texas Experiment Station Field Day Handout. Highlights in Research Special Ediction, pg. VII-VIII.
Genetic and field management strategies to for limiting accumulation of arsenic in rice grains - (Abstract Only)
Pinson, S.R., Tarpley, L., Yan, W., Salt, D.E. 2013. Genetic and field management strategies to for limiting accumulation of arsenic in rice grains [abstract]. American Chemical Society Abstracts, April 7-11, 2013, New Orleans, Louisiana. p.324.
Found: genes controlling the nutrient content of the rice grain Reprint Icon - (Abstract Only)
Pinson, S.R., Tarpley, L., Yeater, K.M., Yan, W., Guerinot, M., Salt, D.E. 2012. Found: genes controlling the nutrient content of the rice grain. ASA-CSSA-SSSA Annual Meeting Abstracts. Agronomy Abstracts Oct. 21-24, 2012 Cincinnati, OH. Paper number: 376-2.
Rice root physiological and morphological traits of diverse genotypes grown in different media Reprint Icon - (Abstract Only)
Chittoori, R., Pinson, S.R., Tarpley, L. 2012. Rice root physiological and morphological traits of diverse genotypes grown in different media. ASA-CSSA-SSSA Annual Meeting Abstracts. Agronomy Abstracts. Cincinatti, OH. Oct. 21-24, 2012 Paper number: 97-8.
Root physiological and morphological characteristics of 24 rice varieties selected for diverse grain mineral Reprint Icon - (Abstract Only)
Chittoori, R., Pinson, S.R., Tarpley, L. 2012. Root physiological and morphological characteristics of 24 rice varieties selected for diverse grain mineral. ASA-CSSA-SSSA Annual Meeting Abstracts. Agronomy Abstracts. Cincinnati, OH. Oct. 21 – 24, 2012 Poster number: 808.
Identification of Genes That Enhance the Nutritional Value of Rice - (Experiment Station)
Pinson, S.R., Tarpley, L., Salt, D.E., Zhang, M., Guerinot, M. 2012. Identification of Genes That Enhance the Nutritional Value of Rice. Texas Rice, July 2012 edition, Special section, pp. VII-IX; http://beaumont.tamu.edu/eLibrary/Newsletter/2012_Highlights_in_Research.pdf Experiment Station Bulletin
Ensuring good rice plant nitrogen assimilation under difficult growing conditions - (Experiment Station)
Ratnaprabha, Pinson, S.R., Salt, D.E., Tarpley, L. 2012. Ensuring good rice plant nitrogen assimilation under difficult growing conditions. Texas Rice, July 2012edition, Special section, pp.XI-XIII. http://beaumont.tamu.edu/elibrary/Newsletter/2012_Highlights_in_Research.pdf Experiment Station Bulletin
Associating rice root morphology and physiological traits with grain mineral concentrations of 24 varieties with extreme mineral compositions - (Proceedings)
Ratnaprabha, Pinson, S.R., Tarpley, L. 2012. Associating rice root morphology and physiological traits with grain mineral concentrations of 24 varieties with extreme mineral compositions. Botanical Society of America Proceedings. 1.
Identification and validation of QTLs associated with concentrations of mineral nutrients in unmilled grain of two mapping populations derived from 'Lemont' × 'TeQing' - (Proceedings)
Pinson, S.R., Min, Z., Tarpley, L., Lahner, B., Guerinot, M., Salt, D. 2012. Identification and validation of QTLs associated with concentrations of mineral nutrients in unmilled grain of two mapping populations derived from 'Lemont' × 'TeQing'. 35th Rice Technical Working Group Meeting Proceedings,Feb.27-March 1, 2012, Hot Springs, Arkansas. CDROM.
Genetic diversity for rice grain mineral concentrations observed among genetically and geographically giverse rice accessions - (Proceedings)
Pinson, S.R., Tarpley, L., Yeater, K.M., Yan, W., Guerinot, M., Salt, D. 2012. Genetic diversity for rice grain mineral concentrations observed among genetically and geographically giverse rice accessions. 35th Rice Technical Working Group Meeting Proceedings. Feb. 27-March 1, 2012, Hot Springs, Arkansas. CDROM.
Putative fissure-resistance QTLs mapped to chromosomes 1 and 8 based on allelic frequency differences observed between fissure-resistant and fissure-susceptible progeny from two segregating populations - (Proceedings)
Pinson, S.R., Gibbons, J., Jia, Y., Yeater, K.M. 2013. Putative fissure-resistance QTLs mapped to chromosomes 1 and 8 based on allelic frequency differences observed between fissure-resistant and fissure-susceptible progeny from two segregating populations. 35TH Rice Technical Working Group Meeting Proceedings, February 27, - March 1, 2012 Hot Springs, Arkansas. CDROM
Can rice grain mineral concentrations be predicted at seedling stage? - (Proceedings)
Ratnaprabha, R., Pinson, S.R., Tarpley, L. 2012. Can rice grain mineral concentrations be predicted at seedling stage? 35TH Rice Technical Working Group Meeting Proceedings, February 27, - March 1, 2012, Hot Springs, Arkansas. CDROM
Associating root morphology and physiology with molybdenum uptake of three rice varieties grown in three pH regimes - (Proceedings)
Ratnaprabha, R., Pinson, S.R., Tarpley, L. 2013. Associating root morphology and physiology with molybdenum uptake of three rice varieties grown in three pH regimes. 35th Rice Technical Working Group Meeting Proceedings. February 27- March 1, 2012, Hot Springs, Arkansas. CDROM
Got Rice? Enhancing Nutritional Qualities in Rice regimes - (Proceedings)
Hirschi, K., Morris, J., Pinson, S.R., Tarpley, L. 2013. Got Rice? Enhancing Nutritional Qualities in Rice Regimes. 35TH Rice Technical Working Group Meeting Proceedings, February 27-March 1, 2012, Hot Springs, Arkansas. CDROM
A digital photography and analysis system for estimation of root and shoot development in rice weed suppression studies in the field - (Abstract Only)
Gealy, D.R., Pinson, S.R. 2013. A digital photography and analysis system for estimation of root and shoot development in rice weed suppression studies in the field. 35th Rice Technical Working Group Meeting Proceedings. February 27, - March 1, 2012, Hot Springs, Arkansas. CDROM
Do rice varieties have differences in their plant mineral nutrition? - (Experiment Station)
Ratnaprapha, Pinson, S.R., Tarpley, L. 2011. Do rice varieties have differences in their plant mineral nutrition?. Extension Reports. November 2011 edition, pg 3-7. Viewed http://beaumont.tamu.edu/eLibrary/Newsletter/2011_Winter_Issue.pdf
Response to early generation selection for resistance to rice kernel fissuring - (Peer Reviewed Journal)
Pinson, S.R., Jia, Y., Gibbons, J. 2013. Response to early generation selection for resistance to rice kernel fissuring. Crop Science. 52:1482-1492.
Variation in grain arsenic assessed in a diverse panel of rice (Oryza sativa)in multiple sites - (Peer Reviewed Journal)
Norton, G.J., Pinson, S.R., Alexander, J., McKay, S., Hansen, H., Duan, G., Islam, M., Islam, S., Stroud, J.L., Zhao, F., McGrath, S.P., Zhu, Y., Lahner, B., Yakubova, E., Guerinot, M., Tarpley, L., Eizenga, G.C., Salt, D.E., Meharg, A.A., Price, A.H. 2012. Variation in grain arsenic assessed in a diverse panel of rice grown in multiple sites. New Phytologist. 193:650–664. doi: 10.1111/j.1469-8137.2011.03983.x.
Finding genes that enhance the nutritional value of rice - (Experiment Station)
Pinson, S.R., Tarpley, L., Zhang, M., Lahner, B., Guerinot, M., Salt, D. 2011. Finding genes that enhance the nutritional value of rice. Extension Reports. October 2011 edition, pp. 3- 6. Available:http://beaumont.tamu.edu/eLibrary/Newsletter/2011_October_Newsletter.pdf
Registration of a rice gene-mapping population consisting of 'TeQing'-into-'Lemont' backcross introgression lines - (Germplasm Registration)
Pinson, S.R., Liu, G., Jia, M.H., Jia, Y., Fjellstrom, R.G., Sharma, A., Wang, Y., Tabien, R.E., Li, Z. 2012. Registration of a rice gene-mapping population consisting of 'TeQing'-into-'Lemont' backcross introgression lines. Journal of Plant Registrations. 6:128-135.
Phenotypic gain from introgression of two QTLs, qSB9-2 and qSB12-1, for rice sheath blight resistance - (Peer Reviewed Journal)
Wang, Y., Pinson, S.R., Fjellstrom, R.G., Tabien, R.E. 2011. Phenotypic gain from introgression of two QTLs, qSB9-2 and qSB12-1, for rice sheath blight resistance. Molecular Breeding. 30:293-303.
Elemental-composition and plant-trait patterns in an ionomically and genetically diverse set of rice germplasm - (Abstract Only)
Pinson, S.R., Tarpley, L., Yeater, K.M., Yan, W., Guerinot, M., Salt, D.E. 2011. Elemental-composition and plant-trait patterns in an ionomically and genetically diverse set of rice germplasm [abstract]. In: Proceedings of American Society of Agronomy Meetings, October 16-17, 2011, San Antonio, TX. Available: http://a-c-s.confex.com/crops/2011am/webprogram/Paper66112.html.
Can Seedling Ionomics Predict Rice Grain Ionomics? - (Abstract Only)
Ratnaprabha, R., Pinson, S.R., Tarpley, L. 2011. Can Seedling Ionomics Predict Rice Grain Ionomics? American Society of Agronomy Meetings. Paper 66150.
Enhanced molybdenum uptake in rice - (Abstract Only)
Ratnaprabha, R., Pinson, S.R., Tarpley, L. 2011. Enhanced molybdenum uptake in rice [abstract]. American Society of Agronomy Meetings, Oct. 16-17, 2011, San Antonio, TX. Available:http://a-c-s.confex.com/crops/2011am/webprogram/Paper66112.html
Comparative ionomes of rice leaves and seeds - (Abstract Only)
Ratnaprabha, Pinson, S.R., Salt, D.E., Tarpley, L. 2011. Comparative ionomes of rice leaves and seeds [abstract]. Botanical Society of America for Poster Presentation at Annual Conference, July 9-13, 2011, St. Louis Missouri. p. 695.
Breeding for rice fissure resistance made possible through development of a new selection technique and identification of molecular gene tags - (Experiment Station)
Pinson, S.R., Gibbons, J., Jia, Y. 2011. Breeding for rice fissure resistance made possible through development of a new selection technique and identification of molecular gene tags. Texas Rice Special Section, Highlighting Research in 2011. p. II.
Applied genetics: Speeding the development of improved varieties by developing breeding tools and genetic knowledge - (Experiment Station)
Pinson, S.R., Tabien, R., Tarpley, L. 2011. Applied genetics: Speeding the development of improved varieties by developing breeding tools and genetic knowledge. Texas Rice Special Section, Highlighting Research in 2011. p. I-II.
Can seedling mineral composition predict rice grain nutritional value? - (Experiment Station)
Ratnaprabha, R., Pinson, S.R., Salt, D.E., Tarpley, L. 2011. Can seedling mineral composition predict rice grain nutritional value? Texas Rice Special Section, Highlighting Research in 2011. p. XIII-XIV.
Genetic Diversity for Concentration of Sixteen Mineral Elements Among Diverse Rice Germplasm - (Abstract Only)
Pinson, S.R., Tarpley, L., Baxter, I.R., Zhang, M., Guerinot, M., Punshon, T., Salt, D.E. 2010. Genetic Diversity for Concentration of Sixteen Mineral Elements Among Diverse Rice Germplasm. In: Proceedings of the American Society of Agronomy Meeting, Oct. 31 - Nov. 4, 2010, Long Beach, CA. 296-1.
Making rice even healthier! - (Experiment Station)
Pinson, S.R., Tarpley, L. 2010. Making rice even healthier! Texas Rice Experiment Station Bulletins. X(8):1,6-8. Available: http://beaumont.tamu.edu/eLibrary/Newsletter/2010_October_Newsletter.pdf.
New method opens opportunity to proactively select for fissure resistance in early breeding generations - (Experiment Station)
Pinson, S.R., Gibbons, J.R., Jia, Y. 2010. New method opens opportunity to proactively select for fissure resistance in early breeding generations. Texas Experiment Station Field Day Handout. VI-VII - http://beaumont.tamu.edu/eLibrary/Newsletter/2010_Highlights_in_Research.pdf..
Found: Rice that produces grains with improved nutritional value - (Experiment Station)
Pinson, S.R., Tarpley, L., Ratnaprabha, Salt, D., Guerinot, M.L. 2010. Found: Rice that produces grains with improved nutritional value. Texas Experiment Station Field Day Handout. VII - VIII; http://beaumont.tamu.edu/eLibrary/Newsletter/2010_Highlights_in_Research.pdf.
Early generation selection for rice fissure resistance proves effective and indicates a fissure resistance gene on chromsome 1 - (Proceedings)
Pinson, S.R., Jia, Y., Gibbons, J. 2010. Early generation selection for rice fissure resistance proves effective and indicates a fissure resistance gene on chromsome 1. Rice Technical Working Group Meeting Proceedings. CDROM.
Genetic diversity for grain mineral concentrations among diverse rice germplasm grown gnder aerobic and anaerobic field conditions - (Proceedings)
Pinson, S.R., Tarpley, L., Salt, D.E., Zhang, M., Baxter, I., Guerinot, M.L., Punshon, T. 2010. Genetic diversity for grain mineral concentrations among diverse rice germplasm grown gnder aerobic and anaerobic field conditions. Rice Technical Working Group Meeting, Biloxi, MS, Feb. 22-25, 2010. CDROM.
Spatially resolved elemental mapping of two U.S. rice core collection grain accessions with diverse arsenic accumulation characteristics via synchrotron x-Ray fluorescence microscopy (SXRF) - (Proceedings)
Punshon, T., Guerinot, M.L., Lanzirotti, A., Pinson, S.R., Tarpley, L., Salt, D.E., Zhang, M., Baxter, I. 2010. Spatially resolved elemental mapping of two U.S. rice core collection grain accessions with diverse arsenic accumulation characteristics via synchrotron x-Ray fluorescence microscopy (SXRF). Rice Technical Working Group Meeting Proceedings, Biloxi, MS, Feb. 22-25, 2010. CDROM.
A population of ‘TeQing’-into-‘Lemont’ chromosome segment substitution lines supports QTL discovery, fine-mapping, and determination of breeding values - (Proceedings)
Pinson, S.R., Liu, G., Jia, M.H., Jia, Y., Fjellstrom, R.G., Sharma, A., Yang, Y., Tabien, R.E., Li, Z. 2009. A population of ‘TeQing’-into-‘Lemont’ chromosome segment substitution lines supports QTL discovery, fine-mapping, and determination of breeding values. 6th International Rice Genetics Symposium on Nov. 16-18, 2009, Manilla, Philippines. P9-1 Page 215.
Bacterial panicle blight resistance QTL in rice (Oryza sativa L.) and their association with resistance to other diseases - (Peer Reviewed Journal)
Pinson, S.R., Shahjahan, A., Rush, M.C., Groth, D.E. 2010. Bacterial panicle blight resistance QTL in rice (Oryza sativa L.) and their association with resistance to other diseases. Crop Science. 50:1287-1297.
RiceCAP: Progress in identifying QTL for sheath blight resistance and milling yield - (Abstract Only)
Mcclung, A.M., Boza, E., Brooks, S.A., Correll, J., Eizenga, G.C., Fjellstrom, R.G., Groth, D.E., Jia, Y., Jodari, F., Linscombe, S.D., Liu, G., Moldenhauer, K.K., Nelson, J.C., Oard, J., Pinson, S.R., Prasad, B., Scheffler, B.E., Yeater, K.M., Wang, Y. 2009. RiceCAP: Progress in identifying QTL for sheath blight resistance and milling yield. American Society of Agronomy Abstracts.
Selection for fissure resistance now made possible in early breeding generations - (Experiment Station)
Pinson, S.R., Gibbons, J., Jia, Y. 2009. Selection for fissure resistance now made possible in early breeding generations. Texas Rice, Highlighting Research in 2009. pp. VI-VII.
Applied Genetics: Developing breeding tools and knowledge - (Experiment Station)
Pinson, S.R., Wang, Y. 2009. Applied Genetics: Developing breeding tools and knowledge. Texas Rice, Highlighting Research in 2009. pp. IX-X.
Effective early-generation selection for rice resistant to kernel fissuring to hasten breeding efforts - (Proceedings)
Pinson, S.R., Gibbons, J.W., Jia, Y. 2009. Effective early-generation selection for rice resistant to kernel fissuring to hasten breeding efforts. Rice Utilization Workshop Proceedings. http://www.usarice.com/doclib/124/3957.pdf.
Early generation selection for resistance to rice kernel fissuring proves effective - (Abstract Only)
Pinson, S.R., Gibbons, J.W., Jia, Y. 2008. Early generation selection for resistance to rice kernel fissuring proves effective. [abstract] American Society of Agronomy Abstracts. p. 552-8.
Spreading culm locus discovered while dissecting a sheath blight resistance QTL within a set of TeQing-into-Lemont introgression lines - (Abstract Only)
Wang, Y., Pinson, S.R., Fjellstrom, R.G., Sharma, A., Tabien, R.E. 2008. Spreading culm locus discovered while dissecting a sheath blight resistance QTL within a set of TeQing-into-Lemont introgression lines. American Society of Agronomy Abstracts paper number 552.8, Houston, TX Oct. 5-9, 2008. CDROM.
Genetic mapping of sheath blight resistance to QTLs within tropical Japonica rice cultivars - (Peer Reviewed Journal)
Sharma, A., McClung, A.M., Pinson, S.R., Kepiro, J.L., Shank, A.R., Tabien, R.E., Fjellstrom, R.G. 2009. Genetic mapping of sheath blight resistance to QTLs within tropical Japonica rice cultivars. Crop Science. 49:256-264.
Registration of TIL:455, TIL:514, and TIL:642, three rice germplasm lines containing introgressed sheath blight resistance alleles - (Peer Reviewed Journal)
Pinson, S.R., Oard, J.H., Groth, D., Miller, R., Jia, M.H., Jia, Y., Fjellstrom, R.G., Mackill, D., Li, Z. 2008. Registration of TIL:455, TIL:514, and TIL:642, three rice germplasm lines containing introgressed sheath blight resistance alleles. Journal of Plant Registrations. 2(3):251-254.
Waxy gene haplotypes: Associations with pasting properties in an international rice germplasm collection - (Peer Reviewed Journal)
Chen, M., Bergman, C.J., Pinson, S.R., Fjellstrom, R.G. 2008. Waxy gene haplotypes: Associations with pasting properties in an international rice germplasm collection. Journal of Cereal Science. 48:781-788.
Using a set of TeQing-into-Lemont chromosome segment substitution lines for fine mapping QTL: Case studies on sheath blight resistance, spreading culm, and mesocotyl elongation - (Proceedings)
Pinson, S.R., Wang, Y., Liu, G., Jia, M.H., Jia, Y., Sharma, A., Fjellstrom, R.G., Tabien, R.E. 2008. Using a set of TeQing-into-Lemont chromosome segment substitution lines for fine mapping QTL: Case studies on sheath blight resistance, spreading culm, and mesocotyl elongation. In: Proceedings of the 32nd Rice Technical Working Group Meetings, February 18-21, 2008, San Diego, CA. 2008. CDROM.
Using TeQing-into-Lemont introgression lines (TILs) to dissect sheath blight resistance QTLs and fine-map a spreading culm gene - (Proceedings)
Wang, Y., Pinson, S.R., Fjellstrom, R.G., Sharma, A., Brooks, S.A., Tabien, R.E. 2008. Using TeQing-into-Lemont introgression lines (TILs) to dissect sheath blight resistance QTLs and fine-map a spreading culm gene. Rice Technical Working Group Meeting Proceedings, San DIego, CA, Feb. 18-21, 2008. CDROM.
Is ALL Rice Bran Created Equal? Reprint Icon - (Proceedings)
Bergman, C.J., Chen, M., Goffman, F.D., Pinson, S.R. 2007. Is ALL Rice Bran Created Equal?. Rice Utilization Workshop Proceedings, New Orleans, LA Feb. 1-2-2007. http://www.usarice.com/doclib/124/3838.pdf.
Resistance to rice grain fissuring: Improving breeding selection techniques and identifying physical, chemical, and genetic factors underlying fissure resistance - (Proceedings)
Pinson, S.R., Osborn, G.S., Thomas, A.E., Mcclung, A.M. 2007. Resistance to rice grain fissuring: Improving breeding selection techniques and identifying physical, chemical, and genetic factors underlying fissure resistance. United States Japan Natural Resources Protein Panel 36:227-231.
A new rice gene-mapping population containing indica chromosomal segments introgressed into a tropical japonica background - (Abstract Only)
Pinson, S.R., Liu, G., Jia, Y., Jia, M.H., Fjellstrom, R.G., Sharma, A. 2007. A new rice gene-mapping populatin containing indica chromosomal segments introgressed into a tropical japonica background. [abstract] American Society of Agronomy Abstracts. p.277-6.
A new micro-chamber method for selecting sheath blight tolerant rice - (Experiment Station)
Pinson, S.R., Fjellstrom, R.G., Tabien, R.E., Mcclung, A.M., Wang, Y. 2007. A new micro-chamber method for selecting sheath blight tolerant rice. Experiment Station Bulletins. http://beaumont.tamu.edu/eLibrary/Newsletter/2007_Highlights_in_Research.pdf. pp.IX-XI.
Rice bran phytonutrients - (Experiment Station)
Chen, M.H., Bergman, C.J., Pinson, S.R. 2007. Rice bran phytonutrients. Experiment Station Bulletins.
Waxy gene haplotypes: Associations with amylose content and the effect by the environment in an international rice germplasm collection - (Peer Reviewed Journal)
Chen, M., Bergman, C.J., Pinson, S.R., Fjellstrom, R.G. 2008. Waxy gene haplotypes: Associations with amylose content and the effect by the environment in an international rice germplasm collection. Journal of Cereal Science. 47:536-545.
Rapid Determination of Rice Cultivar Responses to the Sheath Blight Pathogen Rhizoctonia solani Using a Micro-Chamber Screening Method - (Peer Reviewed Journal)
Jia, Y., Coarrea-Victoria, F., McClung, A.M., Zhu, L., Liu, G., Wamishe, Y., Xie, J., Marchetti, M.A., Pinson, S.R., Rutger, J.N., Correll, J.C. 2006. Rapid determination of rice cultivar responses to the sheath blight pathogen Rhizoctonia solani using a micro-chamber screening method. Plant Disease. 91:485-489.
New Breeding Parents Containing Novel QTL for Rice Sheath Blight Resistance Identified by Combining Phenotypic and Molecular Characterizations - (Proceedings)
Pinson, S.R., Oard, J.H., Groth, D., Miller, R., Liu, G., Jia, Y., Jia, M.H., Fjellstrom, R.G. 2007. New Breeding Parents Containing Novel QTL for Rice Sheath Blight Resistance Identified by Combining Phenotypic and Molecular Characterizations. [abstract]. Plant and Animal Genome Conference XV, January 13-17, 2007, San Diego, CA. Available: http://intl-pag.org/15/abstracts.
Molecular characterization of a population of backcross introgression lines derived from crossing the US japonia rice cultivar Lemont as the recurrent parent withthe Chinese indica cultivar TeQing - (Proceedings)
Liu, G., Jia, Y., Jia, M.H., Fjellstrom, R.G., Sharma, A., Li, Z., Pinson, S.R. 2007. Molecular characterization of a population of backcross introgression lines derived from crossing the US japonia rice cultivar Lemont as the recurrent parent withthe Chinese indica cultivar TeQing. Plant and Animal Genome Conference Proceedings.
Proteomic and Genetic Approaches to Identifying Defense-Related Proteins in Rice Challenged with the Fungal Pathogen Rhizoctonia Solani - (Peer Reviewed Journal)
Lee, J., Bricker, T.R., Lefevre, M., Pinson, S.R., Oard, J.H. 2006. Proteomic and genetic approaches to identifying defense-related proteins in rice challenged with the fungal pathogen Rhizoctonia solani. Molecular Plant Pathology 7(5):405-416.
Incorporating Foreign Sheath Blight Resistance Genes into Us Rice Gemplasm - (Experiment Station)
Pinson, S.R., Fjellstrom, R.G., Shank, A.R., Oard, J., Groth, D., Jia, Y., Jia, M.H. 2006. Incorporating foreign sheath blight resistance genes into us rice gemplasm. Texas Rice, Highlighting Research 2006. pp.VI-VII.
Sheath Blight Resistance in Southern Rice - (Experiment Station)
Kepiro, J.L., Fjellstrom, R.G., McClung, A.M. 2006. Sheath blight resistance in Southern rice. Texas Rice. Highlighting Research in 2006. p. VIII.
Rice functionality, starch structure and the genes - (Experiment Station)
Chen, M.H., Fjellstrom, R.G., Pinson, S.R., McClung, A.M., Bergman, C.J. 2006. Rice functionality, starch structure and the genes. http://beaumont.tamu.edu/eLibrary/Newsletter/2006_Highlights_in_Research.pdf.Texas Rice, Highlighting Research in 2006. p. XII.
Bringing Quantitative Traits under Breeder Control by Combining Qtl Mapping with Candidate Gene Approaches: a Case Study of Rice Sheath Blight Resistance - (Proceedings)
Pinson, S.R., Jia, Y., Fjellstrom, R.G., Jia, M.H., Hulbert, S., Liu, K., Nelson, J.C. 2006. Bringing quantitative traits under breeder control by combining QTL mapping with candidate gene approaches: A case study of rice sheath blight resistance. Rice Technical Working Group Meeting Proceedings, February 29-March 1, 2006, Houston, Texas. 2006 CDROM.
Genotype and environment effects on the tocotrienol, tocopherol, and gamma oryzanol fractions of an international rice germplasm collection - (Proceedings)
Bergman, C.J., Pinson, S.R., Chen, M.H. 2006. Genotype and environment effects on the tocotrienol, tocopherol, and gamma-oryzanol fractions of an international rice germplasm collection. Rice Technical Working Group Meeting Proceedings, February 29-March 1, 2006, Houston, Texas. pp. 117-118. 2006.
Complementary Proteomic and Genetic Analyses of Rice Response to Challenge by the Fungal Pathogen Rhizoctonia Solani - (Proceedings)
Lee, J., Bricker, T.M., Lebevre, M., Pinson, S.R., Cooper, B., Oard, J.H. 2006. Complementary proteomic and genetic analyses of rice response to challenge by the fungal pathogen Rhizoctonia solani [abstract]. Plant and Animal Genome Conference Proceedings. p. P253.
Mapping Sheath Blight Resistance Qtl(s) in Tropical Japonica Rice - (Proceedings)
Sharma, A., Kepiro, J.L., Fjellstrom, R.G., Pinson, S.R., Shank, A.R., McClung, A.M., Tabien, R.E. 2006. Mapping sheath blight resistance QTL(s) in tropical japonica rice. Rice Technical Working Group Meeting Proceedings, February 29-March 1, 2006, Houston, Texas. 2006 CDROM.
Complementary Proteomic and Genetic Analyses of Rice Response to Rice Challenge by the Fungal Pathogen Rhizoctonia Solani - (Proceedings)
Lee, J., Bricker, T.M., Lefevre, M., Pinson, S.R., Cooper, B., Oard, J.H. 2006. Complementary proteomic and genetic analyses of rice response to rice challenge by the fungal pathogen Rhizoctonia solani. Rice Technical Working Group Meeting Proceedings, February 29-March 1, 2006, Houston, Texas. 2006 CDROM.
Mapping Sheath Blight Resistance Qtls in Rice - (Proceedings)
Sharma, Arun, Kepiro, J.L., Fjellstrom, R.G., Pinson, S.R., Shank, A.R., McClung, A.M., Tabien, R. 2006. Mapping sheath blight resistance QTLs in rice [abstract]. Plant and Animal Genome Conference Proceedings. p. 162.
Correlation Between Qtls Conferring Resistance to Four Different Diseases with Each Other and with Rgas Identifies Key Regions for Future Research - (Proceedings)
Pinson, S.R., Hulbert, S., Liu, K., Nelson, J.C. 2005. Correlation between QTLs conferring resistance to four different diseases with each other and with RGAs identifies key regions for future research [abstract]. 5th International Rice Genetics Symposium, Manila, Philippines. p. 95.
Putting Sheath Blight Resistance Genes to Work in the Rice Field - (Experiment Station)
Pinson, S.R. 2005. Putting sheath blight resistance genes to work in the rice field. Texas Rice, Highlighting Research in 2005. pp. VIII-IX.
Nitrogen Utilization Efficiency: Relationships with Grain Yield, Grain Protein and Yield-Related Traits in Rice - (Peer Reviewed Journal)
Samonte, S.B., Wilson, L.T., Medley, J., Pinson, S.R., McClung, A.M., Lales, J. 2006. Nitrogen utilization efficiency: relationships with grain yield, grain protein and yield-related traits in rice. Agronomy Journal 98:168-176.
Nitrogen utilization efficiency: Relationships with grain yield, grain protein, and yield-related traits in rice - (Peer Reviewed Journal)
Samonte, S.O., Wilson, L.T., Pinson, S.R., McClung, A.M., Lales, J.S. 2006. Nitrogen utilization efficiency: Relationships with grain yield, grain protein, and yield-related traits in rice. Agronomy Journal. 98:168-176.
Efficient Analysis of Markers, Genes, and Qtls Using a Permanent Rice Gene-Mapping Population - (Proceedings)
Pinson, S.R., Li, Z., Tabien, R.E., Tai, T.H., Redus, M., Fjellstrom, R.G. 2004. Efficient analysis of markers, genes,and QTLs using a permanent rice gene-mapping population. Plant and Animal Genome Conference XIII. p. 141
The Lemont/teqing Ril Rice Population Provides Unique Opportunity for Correlating Molecular Data with Phenomics - (Proceedings)
Pinson, S.R., Li, Z., Tabien, R.E., Tai, T., Redus, M.A., Fjellstrom, R.G. 2005. The Lemont/Teqing RIL rice population provides unique opportunity for correlating molecular data with phenomics. Proceedings, 2nd International Symposium, Rice Functional Genomics, Tucson, Arizona. p. 150.
Confirming Qtls and Finding Additional Loci Conditioning Sheath Blight Resistance in Rice (Oryza Sativa L.) Using Recombinant Inbred Lines - (Peer Reviewed Journal)
Pinson, S.R., Capdevielle, F.M., Oard, J.H. 2005. Confirming QTLs and finding additional loci conditioning sheath blight resistance in rice (Oryza sativa L.) using recombinant inbred lines. Crop Science. 45:503-510.
Development and Characterization of Rice Mutant Populations for Functional Genomics of Host-Parasite Interactions - (Abstract Only)
Jia, Y., Rutger, J.N., Wang, Z., Singh, P., Martin, R., Pinson, S.R. 2004. Development and characterization of rice mutant populations for functional genomics of host-parasite interactions. American Phytopathological Society Annual Meeting. Phytopathology. 94(6):47.
Developing Rice Varieties with Improved Fissure Resistance: Step 1. Identifying Effective Breeder Selection Techniques. - (Experiment Station)
Pinson, S.R., 2004. Developing rice varieties with improved fissure resistance: Step 1. identifying effective breeder selection techniques. Texas Rice. p. 7-8.
Qtls for Panicle Blight Resistance and Their Association with Resistance to Other Diseases - (Proceedings)
Pinson, S.R., Shahjahan, A.M., Rush, M.C. 2004. QTLs for panicle blight resistance and their association with resistance to other diseases. In: Rice Technical Working Group Meeting Proceedings, February 29-March 4, 2004, New Orleans, LA. 2004 CDROM.
Improved Methods for Identifying Fissure Resistant Rice - (Proceedings)
Pinson, S.R., Osborn, G.S. 2004. Improved methods for identifying fissure resistant rice. In: Rice Technical Working Group Meeting Proceedings, February 29-March 4, 2004, New Orleans, LA. 2004 CDROM.
Progressing from putative QTLs to marker assisted selection in breeding - (Abstract Only)
McClung, A.M., Pinson, S.R., Shank, A.R., Chen, M., Bergman, C.J., Fjellstrom, R.G. 2003. Progressing from putative QTLs to marker assisted selection in breeding [abstract]. Agronomy Abstracts. 2003 CDROM.
Tracking and Taming Rice Genes: How Research Geneticists Assist Plant Breeders - (Other)
PINSON, S.R. TRACKING AND TAMING RICE GENES: HOW RESEARCH GENETICISTS ASSIST PLANT BREEDERS. EXPERIMENT STATION BULLETINS. 2003. 3 pp.
Using a Moisture Transport Model for Identifying the Genes Expressing Field Fissure Resistance in Rice Seed - (Proceedings)
WAGGONER, A.E., OSBORN, G.S., PINSON, S.R. USING A MOISTURE TRANSPORT MODEL FOR IDENITFYING THE GENES EXPRESSING FIELD FISSURE RESISTANCE IN RICE SEED. ASAE ANNUAL INTERNATIONAL MEETING. PAPER NO. 036193, 20 PP. 2003.
Development and Characterization of Rice Mutant Populations for Functional Genomics of Host-Parasite Interactions - (Abstract Only)
Jia, Y., Wang, Z., Singh, P., Rutger, J.N., Martin, R., Pinson, S.R. 2004. Development and characterization of rice mutant populations for functional genomics of host-parasite interactions [abstract]. 15th International Plant Protection Congress Proceedings. p. 64.
Genetic Diversity for Lipid Content and Fatty Acid Profile in Rice Bran - (Peer Reviewed Journal)
Goffman, F.D., Pinson, S.R., Bergman, C.J. 2003. Genetic diversity for lipid content and fatty acid profile in rice bran. Journal of Agricultural and Food Chemistry. 80(5):485-490.
Lipid Content and Fatty Acid Profile in the Bran of a Rice Germplasm Collection - (Proceedings)
GOFFMAN, F.D., PINSON, S.R., BERGMAN, C.J. LIPID CONTENT AND FATTY ACID PROFILE IN THE BRAN OF A RICE GERMPLASM COLLECTION. RICE TECHNICAL WORKING GROUP MEETING PROCEEDINGS. 2002. p. 53.
Confirmation and Further Mapping of Sheath Blight Resistance Qtls in Rice Using Interval Anaylyis, Stepwise Regression and Discriminant Analysis of Ril Data - (Proceedings)
PINSON,S.R., OARD,J.H., CAPDEVIELLE,F.M., MARCHETTI,M.A., CONFIRMATION AND FURTHER MAPPING OF SHEATH BLIGHT RESISTANCE QTLS IN RICE USING INTERVAL ANAYLYIS, STEPWISE REGRESSION AND DISCRIMINANT ANALYSIS OF RIL DATA, PLANT AND ANIMAL GENOME CONFERENCE PROCEEDINGS, 2003. p. 158.
Enhancing U.S. Rice Cultivar Development with Molecular Marker Technology - (Proceedings)
MCCLUNG, A.M., FJELLSTROM, R.G., BORMANS, C.A., BERGMAN, C.J., PINSON, S.R., SHANK, A.R., PARK, W.D. ENHANCING U.S. RICE CULTIVAR DEVELOPMENT WITH MOLECULAR MARKER TECHNOLOGY. PLANT AND ANIMAL GENOME CONFERENCE PROCEEDINGS. 2003. p. 55.
Sheath Blight Resistance Qtls Identified by Interval Analysis, Stepwise Regression and Discriminant Analysis - (Proceedings)
PINSON, S.R., OARD, J., CAPDEVIELLE, F. SHEATH BLIGHT RESISTANCE QTLS IDENTIFIED BY INTERVAL ANALYSIS, STEPWISE REGRESSION AND DISCRIMINANT ANALYSIS. RICE TECHNICAL WORKING GROUP MEETING PROCEEDINGS. 2002. p. 46.
Inheritance of Aroma: Markers Help to Distinguish Fact from Artifact - (Proceedings)
PINSON, S.R., FJELLSTROM, R.G., BERGMAN, C.J., GRIMM, C.C., CHAMPAGNE, E.T. INHERITANCE OF AROMA: MARKERS HELP TO DISTINGUISH FACT FROM ARTIFACT. RICE TECHNICAL WORKING GROUP MEETING PROCEEDINGS. 2002. p. 54.
Semidwarf Breeding Lines with Improved Seedling Vigor Due to Introgressed Genes - (Proceedings)
PINSON, S.R. SEMIDWARF BREEDING LINES WITH IMPROVED SEEDLING VIGOR DUE TO INTROGRESSED GENES. RICE TECHNICAL WORKING GROUP MEETING PROCEEDINGS. 2002. p. 62.
Determining the Effect of Moisture Diffusivity on Fissure Resistance of Four Rice Varieties - (Proceedings)
THOMAS, A., PINSON, S.R., OSBORN, G.S. DETERMINING THE EFFECT OF MOISTURE DIFFUSIVITY ON FISSURE RESISTANCE OF FOUR RICE VARIETIES. RICE TECHNICAL WORKING GROUP MEETING PROCEEDINGS. 2002. p. 119.
Data Mining Approaches for Identification of Elite Genotypes in Germplasm Collections of Rice Using Molecular Marker Information - (Proceedings) - (08-Feb-02)
Lipid Content and Fatty Acid Profile in the Bran of a Rice Germplasm Collection - (Proceedings) - (08-Feb-02)
Develoment of Pcr-Based Markers Associated with Cooked Rice Kernel Elongation and Aroma - (Proceedings)
BERGMAN, C.J., MCCLUNG, A.M., PINSON, S.R., FJELLSTROM, R.G. DEVELOMENT OF PCR-BASED MARKERS ASSOCIATED WITH COOKED RICE KERNEL ELONGATION AND AROMA. RICE TECHNICAL WORKING GROUP MEETING PROCEEDINGS. 2002. p. 53.
Marker-Based Classification of Recombinant Inbred Lines of Rice with Differential Response to Sheath Blight Disease - (Abstract Only) - (02-Jan-02)
Development of Pcr Based Markers Associated with Cooked Rice Kernel Elongation and Aroma - (Proceedings)
BERGMAN, C.J., MCCLUNG, A.M., PINSON, S.R., FJELLSTROM, R.G. DEVELOPMENT OF PCR BASED MARKERS ASSOCIATED WITH COOKED RICE KERNEL ELONGATION AND AROMA. RICE TECHNICAL WORKING GROUP MEETING PROCEEDINGS. 2002. p. 53.
Seedling Vigor Qtls Identified in Tropical Semidwarf Rice - (Proceedings) - (22-Oct-01)
Rflp Mapping of Genes for Complete and Partial Resistance to Blast Disease - (Experiment Station) - (27-Feb-01)
Seedling Vigor Genes Found in Semidwarf Tropical Rice - (Experiment Station) - (27-Dec-00)
Molecular Mapping of Seedling Vigor Qtls in Tropical Rice - (Peer Reviewed Journal) - (16-Dec-00)
Quantitative Trait Loci Affecting Kernel Size and Shape in Rice (Oryza Sativa L.) - (Peer Reviewed Journal) - (16-Dec-00)
Seedling Vigor Qtls Identified in Tropical Semidwarf Rice - (Abstract Only) - (06-Nov-00)
Mapping Qtls for Field Resistance in Rice to the Blast Pathogen and Evaluating Their Individual and Combined Utility in Improved Varieties - (Peer Reviewed Journal) - (28-Jul-00)
Combining Crop Modeling with Economic Risk Analysis to Evaluate Optimal Combinations of Phenotypic Traits - (Proceedings) - (15-Apr-00)
Combining Qtl Mapping with Computer Modeling of Yield Component Traits - (Proceedings) - (20-Mar-00)
Mapping Qtls for Seedling Vigor in Tropical Rice Using Rflps - (Other) - (11-Feb-00)
Seelding Vigor Qtls Mapped in Tropically Adapted Semidwarf Rice - (Proceedings) - (09-Jan-00)
Molecular Analysis to Identify and Study Genes Affecting Milling Quality - (Experiment Station) - (06-Dec-99)
Qtls Affecting Milling Quality among Lemont/teqing Rils - (Proceedings) - (03-Dec-99)
The Expression of High Iron Content in Rice Grains of Two Rice Varieties from China - (Experiment Station) - (01-Dec-99)
Rflp Mapping of Blast Resistance Genes - (Experiment Station) - (01-Dec-99)
Rflp Mapping of Genes Affecting Rice Milling Quality - (Proceedings) - (01-Jun-99)
Locating New Genes for Aroma in Rice That Could Enhance the Aroma of Della and Jasmine 85 Rice Types - (Experiment Station) - (01-May-99)
Creation of a Permanent Rice Mapping Population to Allow Economical Study of Genes Responsible for Numerous Plant and Grain Characters - (Experiment Station) - (01-May-99)
Rflp Mapping of Rice Blast Resistance Qtls in a Recombinant Inbred Line Population Derived from Lemont X Teqing - (Proceedings) - (01-Mar-99)
DNA Markers Associated with Milling Quality - (Proceedings) - (01-Feb-99)
Seedling Vigor Qtls Mapped in Tropically Adapted Semidwarf Rice - (Proceedings) - (27-Sep-98)
Rflp Facilitated Analysis of Tiller and Leaf Angles in Rice (Oryza Sativa L) - (Peer Reviewed Journal) - (27-Sep-98)
Genetic Dissection of the Source-Sink Relationship Affecting Fecundity and Yield in Rice (Oryza Sativa L.) - (Peer Reviewed Journal) - (22-May-98)
Molecular Mapping of Major Genes for Rice Blast Resistance in a Widely Compatible Inter-Subspecific Recombinant Inbred Rice Population - (Proceedings) - (01-Dec-97)
Chromosomal Location and Temporal Expression of Qtls for Partial Resistanceto Rice Blast Disease - (Peer Reviewed Journal) - (01-Dec-97)
Identifying Optimal Phenotypic Trait Sets Using Physiologically-Based Modeling - (Proceedings) - (01-Dec-97)
Genetics of Hybrid Sterility and Hybrid Breakdown in Cultivated Rice (Oryzasativa L.) - (Peer Reviewed Journal) - (07-Oct-97)
T-Dna Integration into Genomic DNA of Rice Following Agrobacterium Inocula-Tion of Isolated Shoot Apices - (Peer Reviewed Journal) - (28-Oct-96)
Epistasis Is An Important Genetic Basis for Three Grain Yeild Components Inrice (Oryza Sativa L.) - (Peer Reviewed Journal) - (19-Aug-96)
Rflp Mapping of Genes for Grain Size and Shape - (Proceedings) - (01-Feb-96)
Rflp Mapping of Genes: Potential, Limits and Current Status - (Proceedings) - (01-Feb-96)
Inheritance of Mesocotyl Length and Seedling Vigor in a Semi-Dwarf Mapping Population - (Proceedings) - (01-Feb-96)
Rflp-Facilitated Genetic Analysis of Source-Link Size Related Traits in Rice (Oryza Sativa L.) - (Proceedings) - (01-Feb-96)
Genetics of Hybrid Sterility and Hybrid Breakdown in Cultivated Rice - (Proceedings) - (01-Feb-96)
Inheritance of Rice Blast Resistance in Progeny of the Cross 'a-301'/jasmine 85 - (Proceedings) - (01-Feb-96)
ARS News Articles
Last Modified: 6/24/2014
Footer Content Back to Top of Page